Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_17ANN09680.325743236United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09690.319573497United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09700.320703354United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_18ANN09710.312530331United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09720.306333501United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09730.311357571United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09750.305255491United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09760.303060177United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09770.310486078United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09780.321180061United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09790.314444575United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09800.321943423United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_19ANN09810.329126788United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09820.316935097United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09830.309563977United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09840.30927323United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09850.310276806United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09860.310429203United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09870.314213805United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09880.303783798United StatesNew Mexico36.7268-104.01913
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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