Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_15ANN09480.307887781United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09490.313374509United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09500.317991027United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09510.308184971United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09520.321607841United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09530.312191978United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09540.307886322United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09550.316954081United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09560.310735582United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09570.314108552United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09580.316118582United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09590.314990751United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09600.31650837United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_17ANN09610.313793314United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09620.304302943United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09630.30622414United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09640.306184879United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09650.312179203United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09660.317768107United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09670.369138365United StatesNew Mexico35.24503-107.68594
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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