Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN09890.307057745United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09900.307983744United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN09910.324191584United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09920.33246917United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09930.312278033United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09940.306055687United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09950.312850428United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09960.305474504United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09970.317380011United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09980.310601852United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09990.303458881United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN10000.313267909United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN10010.315512108United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10020.309182016United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10030.323256199United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10040.309179043United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10050.326803704United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10060.316581075United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10070.315757736United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10080.313549203United StatesColorado38.91004-108.3738
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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