Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_60ANN13990.311227778United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14000.311842949United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14010.303085289United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14020.309985215United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14030.308638559United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14040.317171156United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14050.30773706United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14060.312841749United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14070.31344903United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14080.317357095United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14090.323573397United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14100.312548689United StatesTexas27.77652-97.66801
Helianthus annuusANN_62ANN14190.310424262United StatesIowa42.24842-96.05867
Helianthus annuusANN_62ANN14200.31462071United StatesIowa42.24842-96.05867
Helianthus annuusANN_64ANN14390.310072027United StatesKansas39.68894-99.06605
Helianthus annuusANN_71ANN15010.32294272CanadaSaskatchewan49.23184-102.9884
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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