Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN09270.309145152United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09280.313025163United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09290.308345333United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09300.308760866United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN09310.308324954United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09320.309049916United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09330.314057957United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09340.309617955United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09350.316583687United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09360.313121314United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09370.309514719United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09380.286169069United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09390.315990258United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09400.312682889United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN09410.322315313United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09430.306012669United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09440.311761543United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09450.306289067United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09460.315783804United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09470.309917256United StatesArizona35.03852-110.7351
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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