Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_11ANN09060.313945276United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09070.310298696United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09080.322840598United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09100.312639779United StatesArizona35.19566-114.06666
Helianthus annuusANN_12ANN09110.319116069United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09120.306363428United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09130.3176636United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09140.323673501United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09150.316645769United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09160.312278034United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09170.31108679United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09180.309603858United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09190.320617895United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09200.323204675United StatesArizona35.2533-112.13355
Helianthus annuusANN_13ANN09210.309346322United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09220.315272717United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09230.316924501United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09240.312304237United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09250.310372375United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09260.304876195United StatesArizona34.75056-112.01697
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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