Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_09ANN08850.321197398United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08860.310174842United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08880.321512044United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08890.328855749United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08900.316864954United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_10ANN08910.318571064United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08920.30782569United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08930.321018964United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08940.32159297United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08950.332086773United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08960.310731344United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08970.316675836United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08980.316100939United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08990.317342059United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN09000.31466399United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09010.307982781United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09020.311985269United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09030.304060746United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09040.30598624United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09050.315962334United StatesArizona35.19566-114.06666
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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