Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_07ANN08640.337475064United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08650.330512768United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08660.325972533United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08670.34336846United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08680.323641338United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08690.329797913United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_08ANN08710.316670745United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08720.324195068United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08730.327481855United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08740.323669391United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08750.319662075United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08760.330796623United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08770.327335874United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08780.320688196United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08790.324278645United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08800.3183514United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_09ANN08810.322662402United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08820.312794554United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08830.316287709United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08840.317502965United StatesCalifornia37.43321-118.40646
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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