Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_05ANN08430.319806017United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08440.321441089United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08450.314670874United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08460.316095751United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08470.30946842United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08480.31746441United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08490.309936537United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08500.3121214United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_06ANN08510.315433333United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08520.309638071United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08530.310885992United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08540.308466562United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08550.30487611United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08560.31245143United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08570.31570139United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08580.309332236United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08590.315229576United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_06ANN08600.310706775United StatesCalifornia34.24976-117.45148
Helianthus annuusANN_07ANN08620.31339422United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_07ANN08630.311701596United StatesCalifornia38.7892-119.9363
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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