Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_03ANN08220.310496474United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08230.323302643United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08240.31208981United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08250.325671909United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08260.316908923United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08270.314458399United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08280.30625647United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08290.309295129United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_03ANN08300.323922314United StatesCalifornia36.24542-120.31654
Helianthus annuusANN_04ANN08310.320616609United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08320.333457788United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08330.31776338United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08350.315493454United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08360.313789881United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08370.326186362United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08380.332906477United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08390.326288922United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_04ANN08400.313380044United StatesCalifornia34.75087-119.07235
Helianthus annuusANN_05ANN08410.313658472United StatesCalifornia33.69278-116.18411
Helianthus annuusANN_05ANN08420.323082503United StatesCalifornia33.69278-116.18411
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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