Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_58ANN13790.310597107United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13800.309002526United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13810.320411546United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13820.310677564United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13830.315421567United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13840.318389552United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13850.309014177United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13860.32022881United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13870.325299546United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13880.307196798United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13890.320050242United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13900.316228997United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13910.311483537United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13920.318280108United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13930.316474693United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13940.316702517United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13950.322011269United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13960.322215294United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13970.319574679United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13980.315006893United StatesTexas27.28522-97.66729
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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