Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_56ANN13590.310187882United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13600.307069617United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13610.309642961United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13620.317872336United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13630.319914861United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13640.313454738United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13650.316959033United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13660.313582347United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13670.314968013United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13680.321041435United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13690.321097258United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13700.304345746United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13710.309803627United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13720.311913006United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13730.314616677United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13740.316733282United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13750.30655963United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13760.312252568United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13770.320131996United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13780.32347844United StatesTexas28.24166-97.67443
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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