Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_50ANN12970.312401503United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12980.311830932United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12990.307960196United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13000.306948806United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13010.313163186United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13020.324836053United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13030.308352131United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13040.309396312United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13050.307610767United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13060.303623179United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13070.312454263United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13080.311713077United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13090.312466622United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_51ANN13100.312547287United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13110.308932616United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13120.310171581United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13130.32182539United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13140.308833813United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13150.306521297United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13160.31159789United StatesTexas31.13312-104.02012
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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