Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13170.311646262United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13180.30894397United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13190.310912078United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13210.308298581United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13220.3066761United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13230.309620336United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13240.312794975United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13250.305378606United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13260.30824097United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13270.307691857United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13280.313054841United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13290.300221314United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13300.317404662United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13310.307307253United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13320.302612573United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13330.310157309United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13340.305223289United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13360.304034847United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13370.301112416United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13380.307376876United StatesTexas29.11355-97.39837
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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