Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_48ANN12740.318258218United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12750.339810753United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12760.314254067United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12770.303485199United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12780.310801781United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12790.319644071United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12800.312328182United StatesArizona31.5081-111.01274
Helianthus annuusANN_49ANN12810.331234285United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12830.322321038United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12840.322131547United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12850.324946664United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12860.32917409United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12880.313866256United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12890.315410037United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN12900.31235401United StatesArizona31.43996-110.10544
Helianthus annuusANN_50ANN12910.310116549United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12920.3141158United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12930.318601969United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12940.31210859United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12960.305791993United StatesNew Mexico32.17943-108.38541
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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