Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_46ANN12540.315245283United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12550.309030678United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12560.311352941United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12570.304986929United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12580.315798152United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12590.31137575United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12600.317305142United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_47ANN12610.316388677United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12620.319121785United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12630.312764134United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12640.316161886United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12650.307516467United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12660.313123037United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12670.308704078United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12680.309246475United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12690.308867127United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12700.30908897United StatesArizona32.73158-111.53769
Helianthus annuusANN_48ANN12710.309649465United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12720.315545109United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN12730.3170724United StatesArizona31.5081-111.01274
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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