Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_44ANN12340.318350226United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12350.313498663United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12360.307089847United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12370.319771309United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12380.319296349United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12390.305604455United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12400.314793949United StatesTexas29.05186-99.01808
Helianthus annuusANN_45ANN12410.31622383United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12420.311570448United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12430.326318973United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12440.314450175United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12450.311851693United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12460.330480972United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12470.319703025United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12480.315603957United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12490.317476142United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12500.310613713United StatesTexas28.63085-100.1189
Helianthus annuusANN_46ANN12510.315051034United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12520.312125372United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12530.308952401United StatesCalifornia33.92321-116.86432
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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