Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12140.311225199United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12150.310613217United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12160.304626042United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12170.310969418United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12180.300897317United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12190.31450902United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12200.303273261United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12210.308379276United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12220.306445611United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12230.307037185United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12240.318245784United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12250.312249007United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12260.307528432United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12270.308240807United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12280.322464079United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12290.320090728United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12300.312756856United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12310.325876993United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12320.314675079United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12330.321506746United StatesTexas29.05186-99.01808
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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