Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_40ANN11930.321404399United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11940.298906381United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11950.305216838United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11960.306675169United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11980.303753047United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11990.304765953United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN12000.301379065United StatesKansas37.23327-98.66459
Helianthus annuusANN_41ANN12010.308081344United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12020.310810645United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12030.313284934United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12040.31846288United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12050.305656287United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12060.318073269United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12070.30249514United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12080.308303422United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12090.32344493United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN12100.313134376United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_42ANN12110.300361113United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12120.303158951United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12130.303821051United StatesTexas32.92224-97.36547
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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