Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_38ANN11730.307541355United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11740.312703476United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11750.311926242United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11760.304887563United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11770.316014333United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11780.308716029United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11790.308958022United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11800.312802044United StatesKansas38.44118-98.63231
Helianthus annuusANN_39ANN11810.321848081United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11820.309894036United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11830.307924041United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11840.318513641United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11850.325357573United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11860.313664477United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11870.317147221United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11880.311147018United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11890.310483377United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN11900.315009984United StatesKansas37.45911-97.9179
Helianthus annuusANN_40ANN11910.304837922United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11920.310267274United StatesKansas37.23327-98.66459
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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