Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_23ANN10290.327993005United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10300.312294874United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10310.328404341United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10320.335046954United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10330.334717817United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10340.319896333United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10350.332214833United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10360.326501417United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10370.318815726United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10380.334007861United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10390.330377492United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10400.32491683United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN10410.314838337United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10420.31295072United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10430.317142027United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10440.311148116United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10450.326670549United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10460.309124521United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10470.315571119United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10480.312954663United StatesNevada36.79654-114.09841
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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