Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_25ANN10490.312554151United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN10510.318560232United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10520.310742094United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10530.326534631United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10540.324295736United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10550.312024979United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10560.316110949United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10570.309884398United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10580.315287389United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10590.32530314United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN10600.321072855United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN10610.313558063United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10620.310229615United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10630.31343893United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10640.309986033United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10650.314734175United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10660.308337824United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10670.311591101United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10680.317399203United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10690.315625984United StatesUtah37.13137-112.56561
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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