Details for Phenotype: RGB proportion red (ID: 58)

Phenotype ID:
58
Name:
RGB proportion red
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Proportion of red in average leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_21ANN10090.319387045United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10100.329550768United StatesColorado38.91004-108.3738
Helianthus annuusANN_22ANN10110.314479986United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10120.320962628United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10130.334077982United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10140.316758124United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10150.311151997United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10160.317805104United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10170.314947781United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10180.307317635United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10190.309434959United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10200.312798257United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10210.325770752United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10220.327882248United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10230.320486644United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10240.334772982United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10250.315450709United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10260.319721021United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10270.310648611United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10280.323042528United StatesNevada40.66257-116.23876
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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