Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_17ANN0968194.42United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0969184.571United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0970175.957United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_18ANN0971175.151United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0972163.322United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0973173.479United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0975146.913United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0976147.083United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0977155.263United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0978168.432United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0979170.86United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN0980158.298United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_19ANN0981179.086United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0982193.781United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0983176.642United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0984169.132United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0985171.853United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0986165.516United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0987166.479United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN0988152.783United StatesNew Mexico36.7268-104.01913
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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