Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_15ANN0948166.46United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0949178.1United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0950186.782United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN0951180.807United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0952176.908United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0953175.312United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0954167.315United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0955192.927United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0956171.728United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0957171.272United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0958185.829United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0959182.726United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN0960177.831United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_17ANN0961147.151United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0962164.678United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0963181.021United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0964118.337United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0965193.658United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0966170.958United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN0967189.303United StatesNew Mexico35.24503-107.68594
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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