Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_60ANN1399181.523United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN1400177.878United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN1401168.639United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1402176.531United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1403173.478United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1404187.186United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1405175.325United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1406174.836United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1407177.879United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1408164.077United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1409187.228United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN1410157.889United StatesTexas27.77652-97.66801
Helianthus annuusANN_62ANN1419160.184United StatesIowa42.24842-96.05867
Helianthus annuusANN_62ANN1420169.725United StatesIowa42.24842-96.05867
Helianthus annuusANN_64ANN1439135.504United StatesKansas39.68894-99.06605
Helianthus annuusANN_71ANN1501178.719CanadaSaskatchewan49.23184-102.9884
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
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