Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN0927171.282United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0928179.944United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0929179.873United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0930176.01United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN0931144.205United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0932164.996United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0933183.654United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0934178.801United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0935201.656United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0936190.926United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0937159.763United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0938188.787United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0939176.151United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN0940179.754United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN0941189.659United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0943172.702United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0944152.514United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0945166.702United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0946185.646United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN0947166.538United StatesArizona35.03852-110.7351
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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