Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_11ANN0906175.572United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN0907162.205United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN0908132.282United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN0910172.147United StatesArizona35.19566-114.06666
Helianthus annuusANN_12ANN0911161.189United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0912174.12United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0913183.496United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0914192.895United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0915193.797United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0916180.208United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0917174.514United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0918179.355United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0919182.167United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN0920194.728United StatesArizona35.2533-112.13355
Helianthus annuusANN_13ANN0921175.331United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0922177.015United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0923177.181United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0924166.975United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0925145.203United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN0926144.744United StatesArizona34.75056-112.01697
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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