Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN1317163.692United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN1318166.179United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN1319172.277United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN1321156.822United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1322163.958United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1323182.53United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1324172.896United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1325169.226United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1326162.493United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1327170.791United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1328174.487United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1329168.539United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN1330181.957United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN1331166.41United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1332166.847United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1333169.73United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1334170.295United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1336157.949United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1337147.337United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1338165.829United StatesTexas29.11355-97.39837
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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