Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_54ANN1339165.535United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN1340166.641United StatesTexas29.11355-97.39837
Helianthus annuusANN_55ANN1341168.015United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1342173.055United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1343188.333United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1344167.74United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1345177.019United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1346164.0United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1347161.659United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1348179.243United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1349180.609United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN1350172.582United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN1351167.442United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1352160.499United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1353168.569United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1354188.221United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1355115.485United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1356154.665United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1357159.63United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN1358174.072United StatesTexas28.08852-97.06011
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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