Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_48ANN1274141.005United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1275177.334United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1276152.574United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1277106.651United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1278142.171United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1279155.986United StatesArizona31.5081-111.01274
Helianthus annuusANN_48ANN1280140.41United StatesArizona31.5081-111.01274
Helianthus annuusANN_49ANN1281178.176United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1283166.753United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1284153.785United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1285135.93United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1286142.013United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1288157.959United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1289146.755United StatesArizona31.43996-110.10544
Helianthus annuusANN_49ANN1290146.414United StatesArizona31.43996-110.10544
Helianthus annuusANN_50ANN1291168.427United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN1292173.869United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN1293189.867United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN1294171.655United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN1296164.831United StatesNew Mexico32.17943-108.38541
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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