Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_44ANN1234187.856United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1235191.819United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1236165.603United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1237181.905United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1238179.407United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1239173.826United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1240179.276United StatesTexas29.05186-99.01808
Helianthus annuusANN_45ANN1241185.998United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1242185.775United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1243162.001United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1244185.368United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1245182.109United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1246127.263United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1247175.907United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1248177.314United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1249173.528United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN1250162.356United StatesTexas28.63085-100.1189
Helianthus annuusANN_46ANN1251189.874United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN1252177.009United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN1253170.256United StatesCalifornia33.92321-116.86432
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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