Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN1214143.944United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1215150.322United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1216160.807United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1217176.281United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1218155.352United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1219186.036United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1220167.631United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN1221173.225United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1222169.309United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1223170.608United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1224190.444United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1225174.806United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1226158.187United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1227176.706United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1228162.998United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1229189.137United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN1230178.602United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN1231195.583United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1232167.379United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN1233192.335United StatesTexas29.05186-99.01808
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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