Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_40ANN1193175.819United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1194163.951United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1195161.803United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1196159.951United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1198156.726United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1199157.639United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1200145.896United StatesKansas37.23327-98.66459
Helianthus annuusANN_41ANN1201169.65United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1202162.562United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1203161.16United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1204151.374United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1205154.978United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1206137.767United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1207144.561United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1208146.265United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1209125.332United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_41ANN1210151.724United StatesOklahoma36.80874-98.22242
Helianthus annuusANN_42ANN1211155.353United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1212169.36United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN1213165.321United StatesTexas32.92224-97.36547
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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