Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_38ANN1173148.289United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1174151.431United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1175151.414United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1176158.934United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1177159.632United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1178162.379United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1179157.892United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN1180161.607United StatesKansas38.44118-98.63231
Helianthus annuusANN_39ANN1181157.071United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1182162.32United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1183156.347United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1184157.943United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1185160.946United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1186156.186United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1187158.428United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1188147.914United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1189155.055United StatesKansas37.45911-97.9179
Helianthus annuusANN_39ANN1190180.28United StatesKansas37.45911-97.9179
Helianthus annuusANN_40ANN1191169.887United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN1192164.513United StatesKansas37.23327-98.66459
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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