Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_29ANN1090167.499United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN1091183.476United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1092187.674United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1093176.932United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1094174.856United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1095183.146United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1096188.119United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1097177.08United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1098163.986United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1099168.09United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN1100200.898United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN1101174.277United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1103198.479United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1104160.595United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1105177.177United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1106187.543United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1107202.684United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1108172.626United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1109172.963United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN1110212.191United StatesUtah40.1781-111.65071
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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