Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_27ANN1070190.616United StatesUtah37.13137-112.56561
Helianthus annuusANN_28ANN1071184.083United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1072169.763United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1073175.628United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1074198.841United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1075173.142United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1076160.75United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1077183.857United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1078178.234United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1079194.162United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN1080192.83United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN1081196.015United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1082185.56United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1083179.646United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1084154.663United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1085168.88United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1086181.261United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1087181.825United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1088193.357United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN1089161.171United StatesUtah39.55006-112.35661
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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