Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_32ANN1111178.316United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1112191.604United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1113168.054United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1114174.396United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1115175.383United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1116174.339United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1117186.587United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1118187.815United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1119175.487United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN1120191.571United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN1121176.402United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1122172.516United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1123179.426United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1124184.372United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1125169.554United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1126176.03United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1127163.049United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1128165.577United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1129190.208United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN1130179.788United StatesUtah40.77115-112.15004
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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