Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_25ANN1049180.052United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN1051180.418United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1052176.204United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1053172.68United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1054172.059United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1055179.992United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1056161.263United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1057189.703United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1058174.85United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1059180.527United StatesUtah37.13733-113.51348
Helianthus annuusANN_26ANN1060183.734United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN1061174.966United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1062168.804United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1063203.29United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1064149.639United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1065182.338United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1066165.163United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1067177.55United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1068179.991United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN1069168.367United StatesUtah37.13137-112.56561
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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