Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_23ANN1029212.721United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1030180.986United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN1031191.858United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1032214.361United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1033202.723United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1034192.925United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1035198.182United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1036181.745United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1037172.021United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1038171.478United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1039212.799United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN1040204.4United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN1041166.117United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1042176.523United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1043178.882United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1044166.943United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1045204.319United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1046143.887United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1047179.332United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN1048177.604United StatesNevada36.79654-114.09841
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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