Details for Phenotype: Total RGB (ID: 56)

Phenotype ID:
56
Name:
Total RGB
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Leaf traits
Sub-Category:
Leaf colour
Type:
Quantitative
Ontology:
leaf color
Unit:
No unit available
#Samples:
596
#Populations:
64
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Sum of RGB values for leaf colour
Phenotype Scoring
A evenly illuminated, representative section was selected for a digital image of a leaf for each line (see Leaf_perimeter). RGB values were extracted using the Color histogram plugin (https://imagej.nih.gov/ij/plugins/color-histogram.html) for Fiji (Schneider et al., 2012; Schindelin et al., 2012).

Population Map (64 Populations with 596 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_21ANN1009195.512United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN1010190.347United StatesColorado38.91004-108.3738
Helianthus annuusANN_22ANN1011182.072United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1012192.39United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1013174.579United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1014188.977United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1015158.707United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1016185.576United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1017186.904United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1018164.862United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1019147.653United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN1020171.203United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN1021194.907United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1022197.025United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1023189.543United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1024210.468United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1025197.622United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1026200.015United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1027183.207United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN1028178.023United StatesNevada40.66257-116.23876
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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