Details for Phenotype: Seed shape index internal (ID: 85)

Phenotype ID:
85
Name:
Seed shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_37ANN11681.7499625United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11692.060675United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11701.9005125United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11711.6562125United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11721.7553375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11751.756725United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11761.8514United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11781.845325United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11791.7275875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11801.8507625United StatesKansas38.44118-98.63231
Helianthus annuusANN_40ANN11911.6290125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11921.6678875United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11941.6047875United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11961.96255United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11971.7851125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11981.823125United StatesKansas37.23327-98.66459
Helianthus annuusANN_42ANN12111.8347United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12121.6751625United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12131.513United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12141.6384United StatesTexas32.92224-97.36547
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.