Details for Phenotype: Seed shape index internal (ID: 85)

Phenotype ID:
85
Name:
Seed shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_35ANN11461.7248625United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11471.7233625United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11481.7435125United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11491.9478875United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11501.803775United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11511.5327625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11521.9341625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11531.76285United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11541.8956625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11551.8084875United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11562.0006United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11571.9592125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11581.7502United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11591.574625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11601.789225United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11631.943725United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11641.6876United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11651.7552875United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11661.838675United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11671.912575United StatesColorado40.48679-105.09619
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.