Details for Phenotype: Seed shape index internal (ID: 85)

Phenotype ID:
85
Name:
Seed shape index internal
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the internal ellipse's height to its width
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10801.7858875United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10841.7611625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10851.659275United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10861.8679875United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10891.6056United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10901.7849875United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10911.7938875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10921.6192875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10931.6880625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10941.6508United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10952.0435United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10961.8454625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10971.7780625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10981.7796United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11011.781525United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11031.4802375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11041.613475United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11052.252425United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11061.7751875United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11071.912725United StatesUtah40.1781-111.65071
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.