Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13850.830175United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13860.835225United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13870.8489625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13880.8564625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13890.8322875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13900.8599United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13910.85695United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13920.7998125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13930.7986875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13940.8557125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13950.858925United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13960.8647125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13970.8529625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13980.8635625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13990.8580625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14000.804125United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14010.8736375United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14020.8571125United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14030.848575United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14040.8795625United StatesTexas27.77652-97.66801
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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