Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN13650.846825United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13660.857175United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13670.87675United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13680.8383United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13690.8417United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13700.871375United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13710.8641875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13720.825075United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13730.8584875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13740.8395United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13750.8806375United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13760.851225United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13770.87605United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13780.837875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13790.8184125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13800.8332375United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13810.8745125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13820.8720375United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13830.8520125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13840.8488375United StatesTexas26.50251-97.77181
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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