Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13410.8435625United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13420.854425United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13430.850525United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13440.868375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13450.836925United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13460.841925United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13470.87345United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13480.826125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13500.8584875United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13510.8763United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13520.8612125United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13530.8700875United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13540.8317375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13550.8573125United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13560.839475United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13590.8750375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13600.873825United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13610.8406125United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13630.8463125United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13640.77785United StatesTexas27.63854-97.24526
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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