Details for Phenotype: Seed distal eccentricity (ID: 84)

Phenotype ID:
84
Name:
Seed distal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the top of the ellipse and the bottom of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12150.848United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12170.847775United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12180.8120375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12190.85995United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12200.835228571United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12210.8800625United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12220.863925United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12230.8737375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12240.8206125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12260.849925United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12270.861125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12280.86955United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12290.83185United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12300.8730875United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12320.8591875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12330.8789875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12350.8313625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12360.84965United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12370.8809875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12380.8628United StatesTexas29.05186-99.01808
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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