Details for Phenotype: Seed proximal eccentricity (ID: 83)

Phenotype ID:
83
Name:
Seed proximal eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the distance between the bottom of the ellipse and the top of the seed.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10800.8863875United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10840.866775United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10850.8625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10860.8746United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10890.8819625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10900.87245United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10910.876125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10920.87785United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10930.8817875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10940.8404875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10950.865025United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10960.8752125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10970.8820625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10980.884United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11010.8805United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11030.8813875United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11040.8693United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11050.8782625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11060.878625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11070.87655United StatesUtah40.1781-111.65071
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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