Details for Phenotype: Seed eccentricity (ID: 82)

Phenotype ID:
82
Name:
Seed eccentricity
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height of the internal ellipse to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12150.7523United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12170.7396125United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12180.7175United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12190.7602375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12200.746685714United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12210.78805United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12220.7718United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12230.7636United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12240.7245United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12260.7562875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12270.76975United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12280.7719125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12290.7093125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12300.776075United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12320.7688125United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12330.7851875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12350.7424375United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12360.7396875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12370.7587United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12380.74165United StatesTexas29.05186-99.01808
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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